Under Review
- Gender Based Differences in Functional Connectivity during a Working Memory Task: an fNIRS Study (Submitted to Neurophotonics)
- Ata Akin, "Why We need medical engineers but not biomedical engineers?"
- “Regional Global Efficiency” Transform for improved classification accuracy
- Can quantum mechanics solve the mystery of the existence free will?
- Ben Yapmadım, beynim (mi) yaptırdı?, Kitap çalışması
Published Articles
- Ata Akin, fNIRS-derived neurocognitive ratio as a biomarker for neuropsychiatric diseases, Neurophotonics, 8,3,035008-035008, 2021
- Sinem Burcu Erdoğan, Gülnaz Yükselen, Mustafa Mert Yegül, Ruhi Usanmaz, Engin Kıran, Orhan Derman, Ata Akın, Identification of impulsive adolescents with a functional near infrared spectroscopy (fNIRS) based decision support system, Journal of Neural Engineering, 2021
- SB Erdoğan, E Özsarfati, B Dilek, KS Kadak, L Hanoğlu, A. Akın Classification of motor imagery and execution signals with population-level feature sets: Implications for probe design in fNIRS based BCI, J. Neural Eng. 16 026029, 2019
- E İspirgil, SB Erdoğan, A Akın, O Şakar, The hemodynamic effects of occlusal splint therapy on the masseter muscle of patients with myofascial pain accompanied by bruxism, CRANIO®, 1-10, 2018
- M Dadgostar, SK Setarehdan, S Shahzadi, A Akin, Classification of schizophrenia using SVM via fNIRS, Biomedical Engineering: Applications, Basis and Communications 30 (02), 1850008, 2018
- A Akin, Partial correlation-based functional connectivity analysis for functional near-infrared spectroscopy signals, Journal of biomedical optics 22 (12), 126003, 2017
- Z Einalou, K Maghooli, SK Setarehdan, A Akin, Graph theoretical approach to functional connectivity in prefrontal cortex via fNIRS Neurophotonics 4 (4), 041407, 2017
- Mehrdad Dadgostar, Seyed Kamaledin Setarehdan, Sohrab Shahzadi, Ata Akin, “Functional connectivity of the PFC via partial correlation,” Optik - International Journal for Light and Electron Optics, Volume 127, Issue 11, June 2016, Pages 4748-4754
- Zahra Einalou, Keivan Maghooli, Seyed Kamaledin Setarehdan, Ata Akin, “Effective channels in classification and functional connectivity pattern of prefrontal cortex by functional near infrared spectroscopy signals”, Optik-International Journal for Light and Electron Optics, 127(6), 3271-3275, 2016 (SCIE)
- Serdar, A., Ali Taylan, Cemgil, Ata, Akın, "Joint state and parameter estimation of the hemodynamic model by particle smoother expectation maximization method." Journal of Neural Engineering 13(4): 046010, 2016.
- Serdar Aslan, A. T. Cemgil, M. Ş. Aslan, B. U. Töreyin, A. Akın, “Joint parameter and state estimation of the hemodynamic model by iterative extended Kalman smoother”, Biomedical Signal Processing and Control, Volume 24, February 2016, Pages 47–62 (SCIE)
- M. Ufuk Dalmış, Ata Akın, “Similarity Analysis of Functional Connectivity with fNIRS,” Journal of Biomedical Optics 20 (8), 086012-086012, 2015, (SCIE)
- Zahra Einalou, Keivan Maghooli, Seyed Kamaledin Setarehdan, Ata Akin, “Functional near Infrared Spectroscopy for Functional Connectivity during Stroop test via Mutual Information.” Advances in Bioresearch 6 (1), 62-67, 2015 (SCIE)
- Zahra Einalou, Keyvan Maghooli, Seyed-Kamaledin Setarehdan, Ata Akin, “Functional Near Infrared Spectroscopy to Investigation of Functional Connectivity in Schizophrenia Using Partial Correlation,” Universal Journal of Biomedical Engineering, 2(1), 5-8, 2014
- Sayli, Omer; Akin, Ata; Cotuk, Hasan Birol, “Correlation analysis between surface electromyography and continuous-wave near-infrared spectroscopy parameters during isometric exercise to volitional fatigue” Turkish Journal Of Electrical Engineering And Computer Sciences Volume: 22 Issue: 3 Pages: 780-793, 2014 (SCIE)
- S. B. Erdogan, M. A. Yucel, Ata Akın, Analysis of task-evoked systemic interference in fNIRS measurements: insights from fMRI, NeuroImage, Volume 87, 15 February 2014, Pages 490-504 (SCIE)
- Ertugrul Burtecin Aksel , Ahu Turkoglu , Ayse Ercan , Ata Akin, “Localization of an absorber in a turbid semi-infinite medium by spatially-resolved steady-state diffuse reflectance measurements” J Biomed. Optics, Vol. 16, 086010 (Aug. 22, 2011) (SCIE)
- Özgür Öner, Ata Akın, Hasan Herken, Mehmet Emin Erdal, Koray Çiftçi, Mustafa Ertan, Duygu Bicer, Bedriye Oncu, Ozlem Hekim Bozkurt, Kerim Münir, Yankı Yazgan, “Association Among SNAP-25 Gene DdeI and MnlI Polymorphisms and Hemodynamic Changes During Methylphenidate Use: A Functional Near-Infrared Spectroscopy Study” J. Attention Disorders, 15:628:637, 2011 (SCIE)
- Henrik Winther Schytz, Koray Ciftçi, Ata Akin, Messoud Ashina, Hayrunnisa Bolay, “Intact neurovascular coupling during executive function in migraine without aura: interictal near-infrared spectroscopy study”, Cephalalgia, 30 (4): 457-466 2010 (SCIE)
- Sergül Aydöre, M. Kıvanc¸Mıhçak, R. Koray Çiftci, Ata Akın, “On Temporal Connectivity of PFC Via Gauss-Markov Modeling of fNIRS Signals”, IEEE Trans Biomed 2010 Mar; 57(3):761-8. (SCIE)
- Mustafa Dinler, Demirhan Diracoglu, Erdem Kasikcioglu, Omer Sayli, Ata Akin, Cihan Aksoy, Ahmet Oncel and Ender Berker, Effect of aerobic exercise training on oxygen uptake and kinetics in patients with fibromyalgia, Rheumatol Int, 30:281–284, 2009, (SCIE)
- Meryem A. Yucel, Anna Devor, Ata Akin, David Boas, “The possible role of CO2 in producing a post-stimulus CBF and BOLD undershoot”, Frontiers in Neuroenergetics, 18 November 2009, doi: 10.3389/neuro.14.007.2009
- Omer Sayli , Ertugrul Burtecin Aksel , Ata Akin, “Crosstalk and Error Analysis of Fat Layer on Continuous Wave Near-Infrared Spectroscopy Measurements”, J Biomed Optics, 13(6), 064019-1, 064019-11, 2008 (SCIE)
- Koray Çiftçi, Bülent Sankur, Yasemin Kahya, Ata Akın, "Constraining the general linear model for sensible hemodynamic response function waveforms", Med. & Biol. Engr. & Compt., 46:779–787, 2008 (SCIE)
- Koray Çiftçi, Bülent Sankur, Yasemin Kahya, Ata Akın, “Multilevel Statistical Inference from Functional Near Infrared Spectroscopy Data during Stroop Interference” IEEE Trans Biomed (55), 9, 2212-2220, 2008 (SCIE)
- U E Emir, C Oztürk, A Akın, "Multimodal investigation of fMRI and fNIRS derived breath hold BOLD signals with an expanded balloon model", PHYSIOL. MEAS. 29 (1), 49-63, (2008) (SCIE)
- Tunahan Çakır, Selma Alsan, Hale Saybaşılı, Ata Akın, Kutlu Ö Ülgen, "Reconstruction and flux analysis of coupling between metabolic pathways of astrocytes and neurons: application to cerebral hypoxia" Theoretical Biology and Medical Modelling, 4:48, 2007 (PubMed)
- Mustafa Dinler, Erdem Kaşıkçıoğlu, Ata Akın, Ömer Şayli, Cihan Aksoy, Ahmet Öncel, Ender Berker, “Exercise capacity and oxygen recovery half times of skeletal muscle in patients with fibromyalgia,” Rheumatol. Int. 27, 311-313, 2007 (SCIE)
- Ceyhun B. Akgül, Ata Akın, Bülent Sankur, “Extraction of cognitive activity-related waveforms from functioncal near-infrared signals,” Med. & Biol. Compt. & Engr 2006, 44, 945-958 (SCIE)
- Ata Akin, Didem Bilensoy, “Cerebrovascular reactivity to hypercapnia in migraine patients measured with near-infrared spectroscopy” Brain Research, (1107), 206-214, 2006 (SCIE)
- Ata Akın, Didem Bilensoy, Uzay E. Emir, Murat Gülsoy, Selçuk Candansayar and Hayrunnisa Bolay, “Cerebrovascular dynamics in patients with migraine: Near-infrared spectroscopy study” Neuroscience Letters, (400), 86-91, 2006 (SCIE)
- Erdem Kasikcioglu, Armagan Arslan, Berrin Topcu, Omer Sayli, Hulya Akhan, Huseyin Oflaz, Ata Akın, Abidin Kayserilioglu, Mehmet Meric, “Cardiac fatigue and oxygen kinetics after prolonged exercise” International Journal of Cardiology (108), 286-288, 2006 (SCIE)
- Sinem Tiveci, A.Akın, T. Çakır, H. Saybaşılı, K. Ülgen, “Modeling of Calcium dynamics in brain energy metabolism and Alzheimer’s disease,” Computational Biology and Chemistry, 29 (2), 151-162, 2005 (SCIE)
- Ceyhun Burak Akgül, Bülent Sankur, Ata Akın, “Spectral Analysis of Event-Related Hemodynamic Responses in Functional Near Infrared Spectroscopy”, Journal of Computational Neuroscience (18) 67-83, 2005. (SCIE)
- A.Akın and H. H. Sun “Non-invasive measurement of gastric motility with fast Electrogastrogram (fEGG)” Physiological Measurements, 23, 505–519, 2002 (SCIE)
- A.Akın, H. H. Sun, “Time and Frequency Methods for Detecting Spike Activity of Stomach,” Med. & Biol. Engr. & Compt., vol. 37, pp. 381-390, 1999 (SCIE)
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